Publikationen von Prof. Dr.-Ing. Piotr Wojciech Dabrowski

Critical Assessment of Metagenome Interpretation: the second round of challenges
Fernando Meyer et al. In: nature methods 19. (2022), S. 429-440.

Artikel › Journalartikel › 2022
PathoLive—Real-Time Pathogen Identification from Metagenomic Illumina Datasets
Tausch, Simon H. et al. In: Life 12, 9. (2022), S. 1-17.

Artikel › Journalartikel › 2022
Special Issue "Computational Analysis of Biomedical Data"
Hg. von Dabrowski, Piotr Wojciech. 12(9). (2022), S. 98.

Herausgeberschaft Sonderband Wissenschaftliche Zeitschrift › 2022
NGS read classification using AI
Voigt, Benjamin et al. In: PLOS ONE 16, 12. (2021), S. e0261548.

Artikel › Journalartikel › 2021
NGS read classification using AI
Voigt, Benjamin et al. In: PLoS ONE 16(12). (2021), S. 1-13 (e0261548).

Artikel › Journalartikel › 2021
The virome of German bats: comparing virus discovery approaches
Dabrowski, Piotr Wojciech et al. In: Scientific Reports Vol. 11. (2021), S. 1-18 (7430).

Artikel › Journalartikel › 2021
An environment for sustainable research software in Germany and beyond: current state, open challenges, and call for action
Anzt, Hartwig et al. In: F1000 Research Vol. 9. (2020), S. 1-20 (295).

Artikel › Journalartikel › 2020
First detection of bat-borne Issyk-Kul virus in Europe
Brinkmann, Annika et al. In: Scientific Reports (2020) 10. (2020), S. 1-7 (22384).

Artikel › Journalartikel › 2020
Fostering global data sharing: highlighting the recommendations of the Research Data Alliance COVID-19 working group
Anzt, H et al. In: F1000 Research , 5:267. (2020), S. 1-7.

Artikel › Journalartikel › 2020
RDA COVID-19 Recommendations and Guidelines for Data Sharing
RDA COVID-19 Working Group and Subgroup Members. Hg. von Research Data Alliance. Online: 2020, S. 1-143.
Arbeits- / Diskussionspapier › 2020
Zwiesel bat banyangvirus, a potentially zoonotic Huaiyangshan banyangvirus (Formerly known as SFTS)-like banyangvirus in Northern bats from Germany
Kohl, Claudia et al. In: Scientific Reports (2020) 10. (2020), S. 1-6 (1370).

Artikel › Journalartikel › 2020
PAIPline: pathogen identification in metagenomic and clinical next generation sequencing samples.
Andrusch, A et al. In: PAIPline: pathogen identification in metagenomic and clinical next generation sequencing samples. 2018. (2018), S. 715-721.

Artikel › Journalartikel › 2018
PriLive: privacy-preserving real-time filtering for next-generation sequencing.
Loka, Tobias P et al. In: PriLive: privacy-preserving real-time filtering for next-generation sequencing. 34. (2018), S. 2376-2383.

Artikel › Journalartikel › 2018
seq-seq-pan: building a computational pan-genome data structure on whole genome alignment.
Jandrasits, Christine et al. In: seq-seq-pan: building a computational pan-genome data structure on whole genome alignment. BMC genomics, 19. (2018), S. 47.

Artikel › Journalartikel › 2018
An Early American Smallpox Vaccine Based on Horsepox.
Schrick, Livia et al. In: An Early American Smallpox Vaccine Based on Horsepox. 377. (2017), S. 1491-1492.

Artikel › Journalartikel › 2017
A novel Coltivirus-related virus isolated from free-tailed bats from Côte d'Ivoire is able to infect human cells in vitro.
Weiss, Sabrina et al. In: A novel Coltivirus-related virus isolated from free-tailed bats from Côte d'Ivoire is able to infect human cells in vitro. 14. (2017), S. 181.

Artikel › Journalartikel › 2017
Berlin Squirrelpox Virus, a New Poxvirus in Red Squirrels, Berlin, Germany.
Wibbelt, Gudrun et al. In: Berlin Squirrelpox Virus, a New Poxvirus in Red Squirrels, Berlin, Germany. 23. (2017), S. 1726-1729.

Artikel › Journalartikel › 2017
Comparing Viral Metagenomic Extraction Methods.
Klenner, Jeanette et al. In: Comparing Viral Metagenomic Extraction Methods. 24. (2017), S. 59-70.

Artikel › Journalartikel › 2017
HiLive: real-time mapping of illumina reads while sequencing.
Lindner, Martin S et al. In: HiLive: real-time mapping of illumina reads while sequencing. 33. (2017), S. 913-917.

Artikel › Journalartikel › 2017
Seasonal recurrence of cowpox virus outbreaks in captive cheetahs (Acinonyx jubatus).
Dabrowski, Piotr Wojciech. In: Seasonal recurrence of cowpox virus outbreaks in captive cheetahs (Acinonyx jubatus). PloS one, 12. (2017), S. e0187089.

Artikel › Journalartikel › 2017
A Follow-Up of the Multicenter Collaborative Study on HIV-1 Drug Resistance and Tropism Testing Using 454 Ultra Deep Pyrosequencing.
St John, Elizabeth P et al. In: A Follow-Up of the Multicenter Collaborative Study on HIV-1 Drug Resistance and Tropism Testing Using 454 Ultra Deep Pyrosequencing. 11. (2016), S. e0146687.

Artikel › Journalartikel › 2016
Infection of human airway epithelial cells by different subtypes of Dobrava-Belgrade virus reveals gene expression patterns corresponding to their virulence potential.
Witkowski, Peter T et al. In: Infection of human airway epithelial cells by different subtypes of Dobrava-Belgrade virus reveals gene expression patterns corresponding to their virulence potential. 493. (2016), S. 189-201.

Artikel › Journalartikel › 2016
Rapid characterisation of Klebsiella oxytoca isolates from contaminated liquid hand soap using mass spectrometry, FTIR and Raman spectroscopy.
Dieckmann, Ralf et al. In: Rapid characterisation of Klebsiella oxytoca isolates from contaminated liquid hand soap using mass spectrometry, FTIR and Raman spectroscopy. 187. (2016), S. 353-375.

Artikel › Journalartikel › 2016
Comparative genomic analysis of two novel sporadic Shiga toxin-producing Escherichia coli O104:H4 strains isolated 2011 in Germany.
Tietze, Erhard et al. In: Comparative genomic analysis of two novel sporadic Shiga toxin-producing Escherichia coli O104:H4 strains isolated 2011 in Germany. 10. (2015), S. e0122074.

Artikel › Journalartikel › 2015
Comparison of 454 Ultra-Deep Sequencing and Allele-Specific Real-Time PCR with Regard to the Detection of Emerging Drug-Resistant Minor HIV-1 Variants after Antiretroviral Prophylaxis for Vertical Transmission.
Hauser, Andrea et al. In: Comparison of 454 Ultra-Deep Sequencing and Allele-Specific Real-Time PCR with Regard to the Detection of Emerging Drug-Resistant Minor HIV-1 Variants after Antiretroviral Prophylaxis for Vertical Transmission. 10. (2015), S. e0140809.

Artikel › Journalartikel › 2015
Comprehensive molecular, genomic and phenotypic analysis of a major clone of Enterococcus faecalis MLST ST40.
Zischka, Melanie et al. In: Comprehensive molecular, genomic and phenotypic analysis of a major clone of Enterococcus faecalis MLST ST40. 16. (2015), S. 175.

Artikel › Journalartikel › 2015
Draft Genome Sequences of Klebsiella oxytoca Isolates Originating from a Highly Contaminated Liquid Hand Soap Product.
Hahmann, H et al. In: Draft Genome Sequences of Klebsiella oxytoca Isolates Originating from a Highly Contaminated Liquid Hand Soap Product. 3. (2015).

Artikel › Journalartikel › 2015
First Draft Genome Sequence of Balamuthia mandrillaris, the Causative Agent of Amoebic Encephalitis.
Detering, H et al. In: First Draft Genome Sequence of Balamuthia mandrillaris, the Causative Agent of Amoebic Encephalitis. 3. (2015).

Artikel › Journalartikel › 2015
Genomic Analysis, Phenotype, and Virulence of the Historical Brazilian Smallpox Vaccine Strain IOC: Implications for the Origins and Evolutionary Relationships of Vaccinia Virus.
Medaglia, Maria Luiza G et al. In: Genomic Analysis, Phenotype, and Virulence of the Historical Brazilian Smallpox Vaccine Strain IOC: Implications for the Origins and Evolutionary Relationships of Vaccinia Virus. 89. (2015), S. 11909-25.

Artikel › Journalartikel › 2015
Identification and characterization of episomal forms of integrative genomic islands in the genus Francisella.
Rydzewski, Kerstin et al. In: Identification and characterization of episomal forms of integrative genomic islands in the genus Francisella. 305. (2015), S. 874-80.

Artikel › Journalartikel › 2015
Investigating the zoonotic origin of the West African Ebola epidemic.
Marí Saéz, Almudena et al. In: Investigating the zoonotic origin of the West African Ebola epidemic. 7. (2015), S. 17-23.

Artikel › Journalartikel › 2015
Isolation and functional characterization of the novel Clostridium botulinum neurotoxin A8 subtype.
Kull, Skadi et al. In: Isolation and functional characterization of the novel Clostridium botulinum neurotoxin A8 subtype. 10. (2015), S. e0116381.

Artikel › Journalartikel › 2015
Multiplex Pyrosequencing®: Simultaneous Genotyping Based on SNPs from Distant Genomic Regions
Dabrowski, Piotr Wojciech et al. In: Multiplex Pyrosequencing®: Simultaneous Genotyping Based on SNPs from Distant Genomic Regions. 1315. (2015), S. 337-47.

Artikel › Journalartikel › 2015
Protocol for metagenomic virus detection in clinical specimens.
Kohl, Claudia et al. In: Protocol for metagenomic virus detection in clinical specimens. 21. (2015), S. 48-57.

Artikel › Journalartikel › 2015
RAMBO-K: Rapid and Sensitive Removal of Background Sequences from Next Generation Sequencing Data.
Tausch, Simon H et al. In: RAMBO-K: Rapid and Sensitive Removal of Background Sequences from Next Generation Sequencing Data. 10. (2015), S. e0137896.

Artikel › Journalartikel › 2015
SuRankCo: supervised ranking of contigs in de novo assemblies.
Kuhring, Mathias et al. In: SuRankCo: supervised ranking of contigs in de novo assemblies. 16. (2015), S. 240.

Artikel › Journalartikel › 2015
What caused the outbreak of ESBL-producing Klebsiella pneumoniae in a neonatal intensive care unit, Germany 2009 to 2012? Reconstructing transmission with epidemiological analysis and whole-genome sequencing.
Haller, Sebastian et al. In: What caused the outbreak of ESBL-producing Klebsiella pneumoniae in a neonatal intensive care unit, Germany 2009 to 2012? Reconstructing transmission with epidemiological analysis and whole-genome sequencing. 5. (2015), S. e007397.

Artikel › Journalartikel › 2015
An international multicenter study on HIV-1 drug resistance testing by 454 ultra-deep pyrosequencing.
Simen, Birgitte B et al. In: An international multicenter study on HIV-1 drug resistance testing by 454 ultra-deep pyrosequencing. 204. (2014), S. 31-7.

Artikel › Journalartikel › 2014
Fatal monkeypox in wild-living sooty mangabey, Côte d'Ivoire, 2012.
Radonić, Aleksandar et al. In: Fatal monkeypox in wild-living sooty mangabey, Côte d'Ivoire, 2012. 20. (2014), S. 1009-11.

Artikel › Journalartikel › 2014
Pipasic: similarity and expression correction for strain-level identification and quantification in metaproteomics.
Penzlin, Anke et al. In: Pipasic: similarity and expression correction for strain-level identification and quantification in metaproteomics. 30. (2014), S. i149-56.

Artikel › Journalartikel › 2014
Comparison of host cell gene expression in cowpox, monkeypox or vaccinia virus-infected cells reveals virus-specific regulation of immune response genes.
Bourquain, Daniel et al. In: Comparison of host cell gene expression in cowpox, monkeypox or vaccinia virus-infected cells reveals virus-specific regulation of immune response genes. 10. (2013), S. 61.

Artikel › Journalartikel › 2013
Genome-wide comparison of cowpox viruses reveals a new clade related to Variola virus.
Dabrowski, Piotr Wojtek et al. In: Genome-wide comparison of cowpox viruses reveals a new clade related to Variola virus. 8. (2013), S. e79953.

Artikel › Journalartikel › 2013
Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee.
Coscolla, Mireia et al. In: Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee. 19. (2013), S. 969-76.

Artikel › Journalartikel › 2013
Complete genome sequence of the porcine isolate Enterococcus faecalis D32.
Zischka, Melanie et al. In: Complete genome sequence of the porcine isolate Enterococcus faecalis D32. 194. (2012), S. 5490-1.

Artikel › Journalartikel › 2012
Genome analysis of bat adenovirus 2: indications of interspecies transmission.
Kohl, Claudia et al. In: Genome analysis of bat adenovirus 2: indications of interspecies transmission. 86. (2012), S. 1888-92.

Artikel › Journalartikel › 2012
mPSQed: a software for the design of multiplex pyrosequencing assays.
Dabrowski, Piotr Wojtek; Nitsche, Andreas. In: mPSQed: a software for the design of multiplex pyrosequencing assays. 7. (2012), S. e38140.

Artikel › Journalartikel › 2012
MultiPSQ: a software solution for the analysis of diagnostic n-plexed pyrosequencing reactions.
Dabrowski, Piotr Wojtek et al. In: MultiPSQ: a software solution for the analysis of diagnostic n-plexed pyrosequencing reactions. 8. (2012), S. e60055.

Artikel › Journalartikel › 2012
Rapid detection of anti-Vaccinia virus neutralizing antibodies.
Kramski, Marit et al. In: Rapid detection of anti-Vaccinia virus neutralizing antibodies. 8. (2011), S. 139.

Artikel › Journalartikel › 2011

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Prof. Dr.-Ing. Piotr Wojciech Dabrowski

Rufnummer: +49 30 5019-3397

Piotr.Dabrowski@HTW-Berlin.de

Campus Wilhelminenhof

WH Gebäude C, 614

Wilhelminenhofstraße 75A

12459 Berlin

Hochschule für Technik und Wirtschaft Berlin

University of Applied Sciences

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